Background and objectives: Regardless of prevailing advances in yoga research, the immediate benefit of chandranadi pranayama (CNP) on heart rate variability was not explored. Therefore, in this study, we planned to study the immediate effect of CNP on heart rate, blood pressure and HRV. Methods: One hundred and ten medical students were randomly divided into two groups; control group (n=55) and CNP group (n=55). CNP group participants were individually trained to perform CNP by an experienced yoga instructor with a regularity of 6 breaths/min for five minutes. CG volunteers didn’t undergo CNP, Pre and post intervention HR, BP measurements and spectral analysis of HRV was done in both the groups. The paired student’s t test was used to determine significant differences. Results: There was a significant decrease in HR (p<0.01), BP (p<0.05), LFnu (p<0.05), LF/HF (p<0.001) and increase in HFnu (p<0.01) followed by five minutes of CNP in CNP group. Further, HR, SBP, DBP was reduced by 9.10%, 4.80%, 7.75 % respectively. HRV results showed 7.59% reduction in LFnu, 17.8% reduction in LF/HF and HF was increased by 12.37%. There were no significant changes in CG. Conclusion: It is concluded that CNP is beneficial in reducing HR, BP and to improve Sympathovagal balance. We advise that this effective method be included with the management protocol of hypertension and utilized when immediate reduction of blood pressure is required in day-to-day as well as clinical situations.